Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952060.1_cds_XP_016491885.1_82158
CDS Infomation

[gene=LOC107811469] [db_xref=GeneID:107811469] [protein=putative late blight resistance protein homolog R1B-23] [protein_id=XP_016491885.1] [location=4440..5771] [gbkey=CDS]
Sequence

ATGCTCAAAGCAGGACAACAAGTTGCTGAAAGCTGCAAGGGATTACCTCTTGTGATCGTC
TTGACTGCTGGAATTATTGCAGAGAAAAGGCAAGCCTCTTTATGGCTTGAGGTCGCAAAT
GATTTAAGTTCCCATGTTTTAGAAGAGCAAAGCACGAAGATAATAGAATCAAGTTACGAC
CATTTGGAAGACCATTTAAAGGCTTGTCTTCTTTACATGGGATTGTTTCCAGAAGACTAC
AAAATTCCAGTGTGCGATTTGCTAAAGTTATGGATAGCTGAAAATTTTGTACAGAACATG
GACACAGATAACCTGGAGGAAGCATCTAAGATTTGCTTGAATGGTCTAGTGACCAGAAGC
CTAGTAGTGGTTACTAAAAGGAGAAGTAATGGTGAGATAAAGTATTGCACTGTTCATGAT
TTAGTGCGTGAGTTTTGCTTGAGAAAACTTACAAAAGAAAAGTTTATGCAACTCATAGTC
CCATACAATCGATACCAAACTTTAGGTGCAAAGGAACCTCGGTTATGCATGTATGTCCAT
GACGATCTTGTCCGAGAATTAGTGCAGTACGAATATTCGTTGGATAAGATTCCGATGATG
GCAGGGTTGAAGGAAGGGGAGTCTTTCGCTCAATGTCATGATAGGTCTCTTGAGTTCATT
GCTCATCCAAAATTCTATGCATGGGACCATATAAGTCTTTTTCCTTTACTTGATAACTTT
AGACTTATTCGGGTGCTGCATTTATGGGATATCTACTTGCAAAATTCGTGGGCTACAGCA
ATGCAAGCGGTAACTCACTTGAGATATCTTGCAATTTTTACCCAAAAGTTTGATTTCCAG
TGGATATCACACCTACTCGATCTACAGAATTTGCGGGTGGCATGGAAAGATTCAACAGCA
CTTGATCCCACAATGCGTTTAAAGACATCACCTGCCATTTGGAAAATGCAGAAACTAAGG
CATGTGGATATCAACAAATTTTCCTTCGCTTGGAAAGACAATGATCGAGCAATTTTTGAG
GAATCTCCAAAACCTGTGTTACCGAACTTGAAGACTTTTGGCAAGTGTTGGATATACTTG
GCTGATATGACTCCGGAGTTCTGGTGGAGATTTCCAAATATTGAACAACTCAAACTCCAC
TTTGTTGAACCAGAAGATGAAACTGTAACTAAATACTATGAGGTTCCCACACCAGAAGTT
GATATGCCAAATCTTGAAAAACTCCCACTTCAATCTCTTGAAGTGAGTTTCTCACACACA
AAGTCCACCTACTCAACCATGATGGGGCAGCTGTGTTGTCTTCCCTTCAAATCTAAAACA
TTTGTCCATTGA

Peptide Sequence

PEP ID

XP_016491885.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1B-23 [Nicotiana tabacum]
Sequence

MLKAGQQVAESCKGLPLVIVLTAGIIAEKRQASLWLEVANDLSSHVLEEQSTKIIESSYD
HLEDHLKACLLYMGLFPEDYKIPVCDLLKLWIAENFVQNMDTDNLEEASKICLNGLVTRS
LVVVTKRRSNGEIKYCTVHDLVREFCLRKLTKEKFMQLIVPYNRYQTLGAKEPRLCMYVH
DDLVRELVQYEYSLDKIPMMAGLKEGESFAQCHDRSLEFIAHPKFYAWDHISLFPLLDNF
RLIRVLHLWDIYLQNSWATAMQAVTHLRYLAIFTQKFDFQWISHLLDLQNLRVAWKDSTA
LDPTMRLKTSPAIWKMQKLRHVDINKFSFAWKDNDRAIFEESPKPVLPNLKTFGKCWIYL
ADMTPEFWWRFPNIEQLKLHFVEPEDETVTKYYEVPTPEVDMPNLEKLPLQSLEVSFSHT
KSTYSTMMGQLCCLPFKSKTFVH

Transcript Sequence

Gene sequence data has not been registered.